Carnegie Science, Carnegie Institution, Carnegie Institution for Science,
Palo Alto, CA— The red algae called Porphyra and its ancestors have thrived for millions of years in the harsh habitat of the intertidal zone—exposed to fluctuating temperatures, high UV radiation,...
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Palo Alto, CA— Algae dominate the oceans that cover nearly three-quarters of our planet, and produce half of the oxygen that we breathe. And yet fewer than 10 percent of the algae have been formally...
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Pew announced the 2017 classes of biomedical scholars, Latin American fellows, and Pew-Stewart Scholars for Cancer Research today. Cesar-Cuevas Velazquez of the Department of Plant Biology Dinneny...
Explore this Story
Carnegie Science, Carnegie Institution for Science, Carnegie Institution, Jiaying Zhu
Stanford, CA—Plants are stationary. This means that the way they grow must be highly internally regulated to use the surrounding resources in the most-advantageous way possible. Just imagine if you...
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Washington, D.C.--Plant Biology postdoctoral research associate since 2012, Jia-Ying Zhu was awarded the sixth PIE award for her creativity, productivity, being a great team player in research, “and...
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Carnegie Science, Carnegie Institution, Carnegie Institution for Science
Palo Alto, CA—New work from a joint team of plant biologists and ecologists from Carnegie and Stanford University has uncovered the factor behind an important innovation that makes grasses—both the...
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Stanford, CA—New work from Carnegie’s Shouling Xu and Zhiyong Wang reveals that the process of synthesizing many important master proteins in plants involves extensive modification, or “tagging” by...
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Carnegie Science, Carnegie Institution, Carnegie Institution for Science
Stanford, CA—Climate change and recent heat waves have put agricultural crops at risk, which means that understanding how plants respond to elevated temperatures is crucial for protecting our...
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Carnegie will receive Phase II funding through Grand Challenges Explorations, an initiative created by the Bill & Melinda Gates Foundation that enables individuals worldwide to test bold ideas to address persistent health and development challenges. Department of Plant Biology Director Wolf...
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Fresh water constitutes less than 1% of the surface water on earth, yet the importance of this simple molecule to all life forms is immeasurable. Water represents the most vital reagent for chemical reactions occurring in a cell. In plants, water provides the structural support necessary for plant...
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Carnegie researchers recently constructed genetically encoded FRET sensors for a variety of important molecules such as glucose and glutamate. The centerpiece of these sensors is a recognition element derived from the superfamily of bacterial binding protiens called periplasmic binding protein (...
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Understanding how plants grow can lead to improving crops.  Plant scientist Kathryn Barton, who joined Carnegie in 2001, investigates just that: what controls the plant’s body plan, from  the time it’s an embryo to its adult leaves. These processes include how plant parts form different...
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Plants are essential to life on Earth and provide us with food, fuel, clothing, and shelter.  Despite all this, we know very little about how they do what they do. Even for the best-studied species, such as Arabidopsis thaliana --a wild mustard studied in the lab--we know about less than 20% of...
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Matthew Evans wants to provide new tools for plant scientists to engineer better seeds for human needs. He focuses on one of the two phases to their life cycle. In the first phase, the sporophyte is the diploid generation—that is with two similar sets of chromosomes--that undergoes meiosis to...
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On SFGate: Carnegie's José Dinneny uses firefly proteins to light up certain plants and reveal root system behavior. More
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Stanford, CA— You’ve probably seen news stories about the highly lauded, much-discussed genome editing system CRISPR/Cas9. But did you know the system was actually derived from bacteria, which use it...
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AudioStanford, CA—Plants spend their entire lifetime rooted to one spot. When faced with a bad situation, such as a swarm of hungry herbivores or a viral outbreak, they have no option to flee but...
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Carnegie Science, Carnegie Institution, Carnegie Institution for Science,
July 17, 2017

Palo Alto, CA— The red algae called Porphyra and its ancestors have thrived for millions of years in the harsh habitat of the intertidal zone—exposed to fluctuating temperatures, high UV radiation, severe salt stress, and desiccation.

Red algae comprise some of the oldest non-bacterial photosynthetic organisms on Earth, and one of the most-ancient of all multicellular lineages. They are also fundamentally integrated into human culture and economics around the globe. Some red algae play a major role in building coral reefs while others serve as “seaweed” foods that are integral to various societies. Porphyra is included in salads (as are related genera of algae), is called “nori”

June 21, 2017

Palo Alto, CA— Algae dominate the oceans that cover nearly three-quarters of our planet, and produce half of the oxygen that we breathe. And yet fewer than 10 percent of the algae have been formally described in the scientific literature, as noted in a new review co-authored by Carnegie’s Arthur Grossman in Trends in Plant Science.

Algae are everywhere. They are part of crusts on desert surfaces and form massive blooms in lakes and oceans. They range in size from tiny single-celled organisms to giant kelp.

Algae also play crucial roles in human life. People have eaten “seaweed” (large macroalgae) for millennia. But algae can also represent a health hazard when toxic blooms

June 15, 2017

Pew announced the 2017 classes of biomedical scholars, Latin American fellows, and Pew-Stewart Scholars for Cancer Research today. Cesar-Cuevas Velazquez of the Department of Plant Biology Dinneny lab is among 37 researchers selected.

These new researchers join more than 900 biomedical scientists from many different research backgrounds. “The scholars and fellows will gather at Pew’s annual meeting for the next four years to discuss their research, learn from peers in other fields, and form lasting bonds that will help propel and stimulate cutting-edge research, “stated the Pew press release.

Velazquez is a postdoctoral researcher in the Dinneny lab. He received his Ph. D.

Carnegie Science, Carnegie Institution for Science, Carnegie Institution, Jiaying Zhu
June 1, 2017

Stanford, CA—Plants are stationary. This means that the way they grow must be highly internally regulated to use the surrounding resources in the most-advantageous way possible.

Just imagine if you were stuck in one spot and had to strategize to keep getting water and nutrients from the ground beneath your feet and sunlight on your skin. That’s how plants live!

Luckily for them, plants have a complex system of hormones that guide their growth and maximize their ability to take advantage of the environment. One mastermind hormone is called brassinosteroid.

It can turn on or off more than 2,000 plant genes, and is crucial to normal plant growth—including stem

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Revolutionary progress in understanding plant biology is being driven through advances in DNA sequencing technology. Carnegie plant scientists have played a key role in the sequencing and genome annotation efforts of the model plant Arabidopsis thaliana and the soil alga Chlamydomonas reinhardtii. Now that many genomes from algae to mosses and trees are publicly available, this information can be mined using bioinformatics to build models to understand gene function and ultimately for designing plants for a wide spectrum of applications.

 Carnegie researchers have pioneered a genome-wide gene association network Aranet that can assign functions to genes for which no function had

Fresh water constitutes less than 1% of the surface water on earth, yet the importance of this simple molecule to all life forms is immeasurable. Water represents the most vital reagent for chemical reactions occurring in a cell. In plants, water provides the structural support necessary for plant growth. It acts as the carrier for nutrients absorbed from the soil and transported to the shoot. It also provides the chemical components necessary to generate sugar and biomass from light and carbon dioxide during photosynthesis. While the importance of water to plants is clear, an understanding as to how plants perceive water is limited. Most studies have focused on environmental conditions

Today, humanity is increasingly aware of the impact it has on the environment and the difficulties caused when the environment impacts our communities. Environmental change can be particularly harsh when the plants we use for food, fuel, feed and fiber are affected by this change. High salinity is an agricultural contaminant of increasing significance. Not only does this limit the land available for use in agriculture, but in land that has been used for generations, the combination of irrigation and evaporation gradually leads to increasing soil salinity.

The Dinneny lab focuses on understanding how developmental processes such as cell-type specification regulate responses to

Carnegie will receive Phase II funding through Grand Challenges Explorations, an initiative created by the Bill & Melinda Gates Foundation that enables individuals worldwide to test bold ideas to address persistent health and development challenges. Department of Plant Biology Director Wolf Frommer,  with a team of researchers from the International Rice Research Institute, Kansas State University, and Iowa State University, will continue to pursue an innovative global health research project, titled “Transformative Strategy for Controlling Rice Blight.”

Rice bacterial blight is one of the major challenges to food security, and this project aims to achieve broad, durable

Arthur Grossman believes that the future of plant science depends on research that spans ecology, physiology, molecular biology and genomics. As such, work in his lab has been extremely diverse. He identifies new functions associated with photosynthetic processes, the mechanisms of coral bleaching and the impact of temperature and light on the bleaching process.

He also has extensively studied the blue-green algae Chlamydomonas genome and is establishing methods for examining the set of RNA molecules and the function of proteins involved in their photosynthesis and acclimation. He also studies the regulation of sulfur metabolism in green algae and plants.  

Grossman and

Understanding how plants grow can lead to improving crops.  Plant scientist Kathryn Barton, who joined Carnegie in 2001, investigates just that: what controls the plant’s body plan, from  the time it’s an embryo to its adult leaves. These processes include how plant parts form different orientations, from top to bottom, and different poles. She looks at regulation by small RNA’s, the function of small so-called Zipper proteins, and how hormone biosynthesis and response controls the plant’s growth.

Despite an enormous variety in leaf shape and arrangement, the basic body plan of plants is about the same: stems and leaves alternate in repeating units. The structure responsible for

One way to adapt to climate change is to understand how plants can thrive in the changing environment. José Dinneny looks at the mechanisms that control environmental responses in plants, including responses to salty soils and different moisture conditions—work that provides the foundation for developing crops for the changing climate.

The Dinneny  lab focuses on understanding how developmental processes such as cell-type specification regulate responses to environmental change. Most studies have considered the organ or even the whole organism as a single responsive unit and ignore the potential diversity of responses by the various cell-types composing an organism. Dinneny has

Wolf Frommer believes that understanding the basic mechanisms of plant life can help us solve problems in agriculture, the environment and medicine, and  even provide understanding of human diseases. He and his colleagues develop fundamental tools and technologies that advance our understanding of glucose, sucrose, ammonium, amino acid, and nucleotide transport in plants.

Transport proteins are responsible for moving materials such as nutrients and metabolic products through a cell’s outer membrane, which seals and protects all living cells, to the cell’s interior. These transported molecules include sugars, which can be used to fuel growth or to respond to chemical signals of